CSHL Cold Spring Harbor Laboratory Trapper DB    
Home Browser Annotations Phenotypes BLAST Expression Multiple Help
Enter ET or GT line:

GT9996


Annotated sequences

Sequence: Ds3 primer (406 bp)
TIGR annotation chromosome: 5, insertion site: 20469278, score: 789, pubName: At5g50240,
feature: 68418.t05778, feature coordinates: 20468477-20469687, locus: K6A12.10,
comName: protein-L-isoaspartate O-methyltransferase, putative / PIMT, putative, pubComment: similar to SP Q42539 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) (Protein- beta-aspartate methyltransferase) (PIMT) (Protein L-isoaspartyl methyltransferase) (L-isoaspartyl protein carboxyl methyltransferase) {Arabidopsis thaliana}; contains Pfam profile PF01135: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT),
insertion location: within gene, orientation: GUS same direction as gene, annotated: 2005-08-16



Sequence: Ds5 primer (603 bp)
TIGR annotation chromosome: 5, insertion site: 20469320, score: 1174, pubName: At5g50240,
feature: 68418.t05778, feature coordinates: 20468477-20469687, locus: K6A12.10,
comName: protein-L-isoaspartate O-methyltransferase, putative / PIMT, putative, pubComment: similar to SP Q42539 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) (Protein- beta-aspartate methyltransferase) (PIMT) (Protein L-isoaspartyl methyltransferase) (L-isoaspartyl protein carboxyl methyltransferase) {Arabidopsis thaliana}; contains Pfam profile PF01135: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT),
insertion location: within gene, orientation: GUS same direction as gene, annotated: 2005-08-16



Sequence: Ds5 primer (62 bp)
TIGR annotation No match found, annotated: 2005-08-16


Sequence: Ds5 primer (234 bp)
TIGR annotation chromosome: 5, insertion site: 20469351, score: 418, pubName: At5g50240,
feature: 68418.t05778, feature coordinates: 20468477-20469687, locus: K6A12.10,
comName: protein-L-isoaspartate O-methyltransferase, putative / PIMT, putative, pubComment: similar to SP Q42539 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) (Protein- beta-aspartate methyltransferase) (PIMT) (Protein L-isoaspartyl methyltransferase) (L-isoaspartyl protein carboxyl methyltransferase) {Arabidopsis thaliana}; contains Pfam profile PF01135: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT),
insertion location: within gene, orientation: GUS same direction as gene, annotated: 2005-08-16



Sequence: Ds3 primer (776 bp)
TIGR annotation chromosome: 5, insertion site: 20469296, score: 1251, pubName: At5g50240,
feature: 68418.t05778, feature coordinates: 20468477-20469687, locus: K6A12.10,
comName: protein-L-isoaspartate O-methyltransferase, putative / PIMT, putative, pubComment: similar to SP Q42539 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) (Protein- beta-aspartate methyltransferase) (PIMT) (Protein L-isoaspartyl methyltransferase) (L-isoaspartyl protein carboxyl methyltransferase) {Arabidopsis thaliana}; contains Pfam profile PF01135: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT),
insertion location: within gene, orientation: GUS same direction as gene, annotated: 2005-08-16



Sequence: Ds5 primer (785 bp)
TIGR annotation chromosome: 5, insertion site: 20469287, score: 1469, pubName: At5g50240,
feature: 68418.t05778, feature coordinates: 20468477-20469687, locus: K6A12.10,
comName: protein-L-isoaspartate O-methyltransferase, putative / PIMT, putative, pubComment: similar to SP Q42539 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) (Protein- beta-aspartate methyltransferase) (PIMT) (Protein L-isoaspartyl methyltransferase) (L-isoaspartyl protein carboxyl methyltransferase) {Arabidopsis thaliana}; contains Pfam profile PF01135: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT),
insertion location: within gene, orientation: GUS same direction as gene, annotated: 2005-08-16





Expression

No aerial expression scores are available for this line.

No root expression scores are available for this line.



Phenotype:   none yet observed



Pedigree:   DsG6 X Ac6